python

Feature selection

Using an available library for feature selection based on Genetic algorithm feature selection (sklearn-genetic-opt) The idea is to make it generic and easy to use with the terminal and with logging possibility.

Introduction to Bioimage analysis for Master of Science in Neurosciences

Introduction to Bioimage analysis for Master of Science (M.Sc.) in Neurosciences. See repository for details See below Repository link Repository Link Introduction to Bioimage analysis FIJI Clij2 GPU Weka ML course Introduction to Bioimage analysis for Master of Science (M.

Imaging analysis of neuronal activity

Can we find identify functionally distinct neurons by using clustering and linear regression? Answer: Yes. This approach reveals functionally distinct neuronal classes. See below Notebook or Repository link Repository Link Neuronal imaging

Analysing behavioral data using clustering

Can we use clustering to find meaningful insights when zebrafish are faced with two competing threatening stimuli? Answer: No. This approach does not reveal distinct response types.Clustering is NOT a good approach for this behavioral data.